Copy model object to iterate over base model

Copies previously executed model into a new object and optionally accept all estimates returned from model execution. A new working directory is created and all files from base model are copied into it.

Usage

copyModel(model, acceptAllEffects = FALSE, modelName = "", workingDir = "")

Arguments

model

Model object to be copied

acceptAllEffects

Set to TRUE to accept all effects, update PML statements, and test.mdl file from original model run

modelName

New model name for subdirectory created for model output. Subdirectory is created in current working directory.

workingDir

Working directory to run the model. Current working directory will be used if workingDir not specified.

Value

Modified NlmePmlModel object

Examples

if (FALSE) { # \dontrun{
model <- pkmodel(
  parameterization = "Clearance",
  numCompartments = 2,
  data = pkData,
  ID = "Subject",
  Time = "Act_Time",
  A1 = "Amount",
  CObs = "Conc",
  workingDir = tempdir()
  )
 host <- hostParams(sharedDirectory = tempdir(),
                    parallelMethod = "None",
                    hostName = "local",
                    numCores = 1)
job <- fitmodel(model,
                numIterations = 3,
                hostPlatform = host)

finalModelVPC <- copyModel(model,
                           acceptAllEffects = TRUE,
                           modelName = "model_VPC",
                           workingDir = tempdir())
} # }