Reference

All functions

add_Covariate()

Add Covariate into PML models

add_StParm()

Add Structural parameter into PML models Dosepoints

Covariate()

Create a new Covariate object and validate it

create_pyDarwinOptions()

Create pyDarwin Options

Dosepoint()

Create a new Dosepoint object and validate it

get_ModelTermsToMap()

Get Model Terms to Map

get_PMLParametersSets()

Get the list of objects describing the PML models by set of parameters

InitialEstimate()

Create an object of class InitialEstimate

list_Covariates()

List Covariates in the currrent PML set

list_Dosepoints()

List Dosepoints in the current PML set

list_Observations()

List Observations in the current PML set

list_Omegas()

List Unique Omega Names

list_StParms()

List Structural Parameters in the currrent PML set

list_Thetas()

List Unique Theta Names

modify_Dosepoint()

Modify Dosepoint in PML models

modify_Observation()

Modify Observation class in PML models

modify_Omega()

Modify Omega Parameters in PML Models

modify_StParm()

Modify structural parameter in PML models set

modify_Theta()

Modify Theta Parameters in PML Models

Observation()

Create an instance of Observation class.

Omega()

Create an Omega instance with validation

pyDarwinOptionsGA()

Create options for the Genetic Algorithm (GA) in pyDarwin.

pyDarwinOptionsGridAdapter()

Grid Adapter Options for pyDarwin

pyDarwinOptionsPenalty()

Create pyDarwin Penalty Options

pyDarwinOptionsPostprocess()

Create pyDarwin Postprocess Options

pyDarwinOptionsPSO()

Create options for the Particle Swarm Optimization (PSO) in pyDarwin.

remove_Covariate()

Remove Covariate from PML models

remove_Observation()

Remove Observation from PML models

remove_StParm()

Remove structural parameter from PML models

run_pyDarwin()

Run pyDarwin Model Search

Sigmas()

Create an instance of Sigmas class.

specify_EngineParams()

Specify engine parameters for model execution

specify_SimParams()

Specify engine parameters for model simulation

stop_pyDarwin()

Stop pyDarwin Model Search

StParm()

Create an instance of a Structural parameter.

Table()

Class initializer for NLME tables

Theta()

Create a new Theta instance with validation.

write_ModelTemplateTokens()

Prints NLME metamodel template file and token json file using given options, filepaths and data

write_pyDarwinOptions()

Write pyDarwin options to a JSON file.