Index

_

__init__() (darwin.Population.Population method)

A

add_model_run() (darwin.Population.Population method)

AsyncMemoryModelCache (class in darwin.MemoryModelCache)

C

calc_fitness() (darwin.ModelResults.ModelResults method) check_files_present_impl() (darwin.ModelRun.ModelRun method)

cleanup() (darwin.ModelRun.ModelRun method) create_model_cache() (in module darwin.ModelCache)

D

darwin.algorithms.exhaustive module darwin.algorithms.GA module darwin.algorithms.OPT module darwin.algorithms.run_downhill module darwin.MemoryModelCache module darwin.Model module darwin.ModelCache module darwin.ModelCode module

darwin.ModelResults module darwin.ModelRun module darwin.Population module darwin.run_search module darwin.run_search_in_folder module darwin.Template module dump() (darwin.MemoryModelCache.AsyncMemoryModelCache method) (darwin.MemoryModelCache.MemoryModelCache method) (darwin.ModelCache.ModelCache method)

F

finalize() (darwin.MemoryModelCache.AsyncMemoryModelCache method) (darwin.ModelCache.ModelCache method) find_model_run() (darwin.MemoryModelCache.MemoryModelCache method) (darwin.ModelCache.ModelCache method) finish() (darwin.ModelRun.ModelRun method) from_codes() (darwin.Population.Population class method)

from_dict() (darwin.Model.Model class method) (darwin.ModelResults.ModelResults class method) (darwin.ModelRun.ModelRun class method) from_full_binary() (darwin.ModelCode.ModelCode class method) from_int() (darwin.ModelCode.ModelCode class method) from_min_binary() (darwin.ModelCode.ModelCode class method)

G

genotype() (darwin.Model.Model method) get_best_run() (darwin.Population.Population method) get_best_runs() (darwin.Population.Population method) get_message_text() (darwin.ModelResults.ModelResults method)

get_model_cache() (in module darwin.ModelCache) get_remaining_model_num() (in module darwin.Population) get_search_space() (in module darwin.algorithms.exhaustive) get_search_space_coordinates() (darwin.Template.Template method) get_search_space_size() (in module darwin.algorithms.exhaustive)

I

init_pop_nums() (in module darwin.Population)

init_stem() (darwin.ModelRun.ModelRun method) is_duplicate() (darwin.ModelRun.ModelRun method)

J

json_to_run() (in module darwin.ModelRun)

K

keep() (darwin.ModelRun.ModelRun method)

L

load() (darwin.MemoryModelCache.MemoryModelCache method) (darwin.ModelCache.ModelCache method)

log_run() (in module darwin.ModelRun)

M

make_control_file() (darwin.ModelRun.ModelRun method) MemoryModelCache (class in darwin.MemoryModelCache) Model (class in darwin.Model) ModelCache (class in darwin.ModelCache) ModelCode (class in darwin.ModelCode) ModelResults (class in darwin.ModelResults) ModelRun (class in darwin.ModelRun) module darwin.algorithms.exhaustive darwin.algorithms.GA darwin.algorithms.OPT darwin.algorithms.run_downhill darwin.MemoryModelCache darwin.Model darwin.ModelCache darwin.ModelCode darwin.ModelResults darwin.ModelRun darwin.Population darwin.run_search darwin.run_search_in_folder darwin.Template

O

output_results() (darwin.ModelRun.ModelRun method)

P

Population (class in darwin.Population)

R

register() (in module darwin.MemoryModelCache) register_model_cache() (in module darwin.ModelCache) run() (darwin.Population.Population method) run_command() (darwin.ModelRun.ModelRun method) run_downhill() (in module darwin.algorithms.run_downhill) run_exhaustive() (in module darwin.algorithms.exhaustive)

run_ga() (in module darwin.algorithms.GA) run_model() (darwin.ModelRun.ModelRun method) run_search() (in module darwin.run_search) run_search_in_folder() (in module darwin.run_search_in_folder) run_skopt() (in module darwin.algorithms.OPT) run_to_json() (in module darwin.ModelRun)

S

set_model_cache() (in module darwin.ModelCache) set_status() (darwin.ModelRun.ModelRun method)

started() (darwin.ModelRun.ModelRun method) store_model_run() (darwin.MemoryModelCache.MemoryModelCache method) (darwin.ModelCache.ModelCache method)

T

Template (class in darwin.Template) to_dict() (darwin.Model.Model method) (darwin.ModelResults.ModelResults method) (darwin.ModelRun.ModelRun method)

W

write_best_model_files() (in module darwin.ModelRun)