Installation¶
System Requirements¶
Windows¶
Windows 10, 11
Windows Server 2019
Linux¶
CentOS8/RHEL8
Ubuntu >= 18.0.4
Hardware Requirements¶
Minimum and recommended requirements:
Minimum |
Recommended |
|
|---|---|---|
Processor |
Intel i5 processor 3 GHz |
Intel i7 processor 4 GHz |
Number of physical cores |
4 |
16 |
RAM |
16 GB RAM |
32 GB RAM |
Internal Storage Device |
1 GB HDD |
100 GB SSD |
Grid Computing Requirements¶
pyDarwin may be executed on Linux hosts with Sun Grid Engine (SGE), or Slurm.
Software Requirements¶
Python 3.10, 3.11, 3.12
NLME-Engine >= 24.9
NONMEM >= 7.4.3
R >= 4.0.0 (optional)
Install pyDarwin¶
Before installing pyDarwin, you may optionally create a python virtual environment to maintain isolation of package
dependencies. This is recommended as a best practice, but is not required. If you only use Python for pyDarwin and do not
plan to install other Python packages, you can skip this step and install pyDarwin directly to your system’s site library.
To create a virtual environment, from the command line, type:
python -m venv .venv
.venv\Scripts\activate
Both the development version and released version of pyDarwin are available to install via pip from Certara’s managed PyPi repository.
Installation commands:
pip install pyDarwin-Certara --index-url https://certara.jfrog.io/artifactory/api/pypi/certara-pypi-release-public/simple --extra-index-url https://pypi.python.org/simple/
pip install pyDarwin-Certara --pre --upgrade --force-reinstall --index-url https://certara.jfrog.io/artifactory/api/pypi/certara-pypi-develop-local/simple --extra-index-url https://pypi.python.org/simple/