Prediction corrected Visual Predictive Check (pcVPC)

Specify prediction variable for pcVPC.

predcorrect(o, ...)

# S3 method for tidyvpcobj
predcorrect(o, pred, data = o$data, ..., log = FALSE)

Arguments

o

A tidyvpcobj.

...

Other arguments to include.

pred

Prediction variable in observed data.

data

Observed data supplied in observed() function.

log

Logical indicating whether DV was modeled in logarithmic scale.

Value

Updates tidyvpcobj with required information to performing prediction correction, which includes the predcor logical indicating whether prediction corrected VPC is to be performed, the predcor.log logical indicating whether the DV is on a log-scale, and the pred prediction column from the original data.

See also

observed simulated censoring stratify binning binless vpcstats

Examples

require(magrittr)

obs_data <- obs_data[MDV == 0]
sim_data <- sim_data[MDV == 0]

 # Add PRED variable to observed data from first replicate of 
 # simulated data
 
obs_data$PRED <- sim_data[REP == 1, PRED]

  vpc <- observed(obs_data, x=TIME, y=DV) %>%
       simulated(sim_data, y=DV) %>%
       binning(bin = NTIME) %>%
       predcorrect(pred=PRED) %>%
       vpcstats()
       
 # \donttest{    
 # For binless loess prediction corrected, use predcorrect() before 
 # binless() and set loess.ypc = TRUE
 
  vpc <- observed(obs_data, x=TIME, y=DV) %>%
       simulated(sim_data, y=DV) %>%
       predcorrect(pred=PRED) %>%
       binless(loess.ypc = TRUE) %>%
       vpcstats()
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
#> Warning: tiny diagonals replaced with Inf when calling blkfct
       # }