Certara.DarwinReporter is an R package for importing
and analyzing output files from a pyDarwin automated model search. Use
the function darwin_data() to initialize the
darwin_data class object, to be supplied to plotting
functions and the Shiny application for interactive analysis and
RMarkdown report generation.
The function fitness_vs_iteration() has been made
available to plot mean/min fitness by iteration.
The function fitness_penalties_vs_iteration() has
been made available to plot the composition of fitness (e.g., OFV and
penalties) by iteration.
A Shiny application is provided to create, customize, and
generate the underlying code for model diagnostics plots and tables used
to evaluate a pyDarwin automated model search. The Shiny application can
be run with the function darwinReportUI().
Supports analysis of either NLME or NONMEM pyDarwin automated model search output.